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PAUP* vs TNT

By Christopher Taylor at 9/13/2007 01:33:00 pm
I need to buy some phylogenetic analysis software to conduct analyses of morphological characters in Windows. At the moment, I think the main contenders are the old standard of PAUP* and the more recent TNT. Does anyone have any advice on how these two compare? Also, does anyone have a couple of good references for me to learn what all the analysis parameters (branch-addition, branch-swapping parameters, etc.) actually mean?

1 comment:

  1. Anonymous8 July 2011 at 01:37

    I have only used PAUP.I found the FAQ pretty good at sorting things out (though I only used DNA and AA sequences).

    http://paup.csit.fsu.edu/paupfaq/faq.html

    /TheOtherJim

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